Supported Atomic Operations¶
Numba provides access to some of the atomic operations supported in CUDA. Those that are presently implemented are as follows:
-
class
numba.cuda.
atomic
Namespace for atomic operations
-
class
add
(ary, idx, val) Perform atomic ary[idx] += val. Supported on int32, float32, and float64 operands only.
Returns the old value at the index location as if it is loaded atomically.
-
class
compare_and_swap
(ary, old, val) Conditionally assign
val
to the first element of an 1D arrayary
if the current value matchesold
.Returns the current value as if it is loaded atomically.
-
class
max
(ary, idx, val) Perform atomic ary[idx] = max(ary[idx], val).
Supported on int32, int64, uint32, uint64, float32, float64 operands only.
Returns the old value at the index location as if it is loaded atomically.
-
class
min
(ary, idx, val) Perform atomic ary[idx] = min(ary[idx], val).
Supported on int32, int64, uint32, uint64, float32, float64 operands only.
Returns the old value at the index location as if it is loaded atomically.
-
class
nanmax
(ary, idx, val) Perform atomic ary[idx] = max(ary[idx], val).
NOTE: NaN is treated as a missing value such that: nanmax(NaN, n) == n, nanmax(n, NaN) == n
Supported on int32, int64, uint32, uint64, float32, float64 operands only.
Returns the old value at the index location as if it is loaded atomically.
-
class
nanmin
(ary, idx, val) Perform atomic ary[idx] = min(ary[idx], val).
NOTE: NaN is treated as a missing value, such that: nanmin(NaN, n) == n, nanmin(n, NaN) == n
Supported on int32, int64, uint32, uint64, float32, float64 operands only.
Returns the old value at the index location as if it is loaded atomically.
-
class
sub
(ary, idx, val) Perform atomic ary[idx] -= val. Supported on int32, float32, and float64 operands only.
Returns the old value at the index location as if it is loaded atomically.
-
class
Example¶
The following code demonstrates the use of numba.cuda.atomic.max
to
find the maximum value in an array. Note that this is not the most efficient way
of finding a maximum in this case, but that it serves as an example:
from numba import cuda
import numpy as np
@cuda.jit
def max_example(result, values):
"""Find the maximum value in values and store in result[0]"""
tid = cuda.threadIdx.x
bid = cuda.blockIdx.x
bdim = cuda.blockDim.x
i = (bid * bdim) + tid
cuda.atomic.max(result, 0, values[i])
arr = np.random.rand(16384)
result = np.zeros(1, dtype=np.float64)
max_example[256,64](result, arr)
print(result[0]) # Found using cuda.atomic.max
print(max(arr)) # Print max(arr) for comparison (should be equal!)
Multiple dimension arrays are supported by using a tuple of ints for the index:
@cuda.jit
def max_example_3d(result, values):
"""
Find the maximum value in values and store in result[0].
Both result and values are 3d arrays.
"""
i, j, k = cuda.grid(3)
# Atomically store to result[0,1,2] from values[i, j, k]
cuda.atomic.max(result, (0, 1, 2), values[i, j, k])
arr = np.random.rand(1000).reshape(10,10,10)
result = np.zeros((3, 3, 3), dtype=np.float64)
max_example_3d[(2, 2, 2), (5, 5, 5)](result, arr)
print(result[0, 1, 2], '==', np.max(arr))